STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trim62Tripartite motif containing 62, tandem duplicate 1. (524 aa)    
Predicted Functional Partners:
LOC102078975
Caspase recruitment domain family, member 9.
   
 
 0.739
trim33
Tripartite motif containing 33.
      
 0.589
Trim37
Tripartite motif containing 37.
      
 0.552
trim44
Tripartite motif containing 44.
    
 
 0.542
tab2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 
 0.488
LOC102082122
Transcription intermediary factor 1-alpha isoform X1.
      
 0.465
LOC102078235
Tripartite motif-containing protein 66 isoform X1.
      
 0.465
LOC100710042
Dystrobrevin binding protein 1b.
    
 
 0.438
Trim32
Tripartite motif containing 32.
    
 0.412
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.