STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100695749Retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma. (80 aa)    
Predicted Functional Partners:
LOC100706644
Phosphodiesterase.
   
 
 0.935
pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.
  
 
 
0.908
LOC100697435
Uncharacterized protein.
  
  
 
0.902
LOC100703259
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 
 0.778
LOC100706288
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 
 0.739
LOC100711075
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 
 0.739
LOC100708779
Guanylate cyclase.
   
 
 0.708
LOC100703896
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
   
 
 0.699
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
   
 
 0.699
I3K1E4_ORENI
Guanylate cyclase.
   
 
 0.693
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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