STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100696505Mbt domain containing 1. (702 aa)    
Predicted Functional Partners:
I3KQY8_ORENI
Si:ch211-195d17.2.
    
 0.855
RING1
RING-type domain-containing protein.
    
 0.767
rnf2
Ring finger protein 2.
    
 0.767
tfdp1
Transcription factor.
   
 0.745
pcgf1
Polycomb group ring finger 1.
    
 0.740
pcgf6
Polycomb group RING finger protein 6.
    
 0.740
YY1
YY1 transcription factor b.
    
 0.727
LOC100703461
YY1 transcription factor.
    
 0.727
ENSONIP00000053028
MAX gene-associated protein isoform X1.
   
 0.703
I3K0Z9_ORENI
DUF4801 domain-containing protein.
   
 0.703
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.