STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100700165Uncharacterized protein; Belongs to the cytochrome P450 family. (535 aa)    
Predicted Functional Partners:
ephx2
Epoxide hydrolase 2, cytoplasmic.
  
 0.918
LOC100694260
Cytochrome P450, family 2, subfamily U, polypeptide 1; Belongs to the cytochrome P450 family.
  
 
 
0.913
LOC100699955
Prostaglandin-endoperoxide synthase 1.
   
 
 0.902
LOC100698983
Arachidonate 12-lipoxygenase.
    
  0.901
alox5
Arachidonate 5-lipoxygenase a.
    
  0.901
ptgs2
Prostaglandin-endoperoxide synthase 2b.
   
 
  0.900
LOC100711960
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
0.752
LOC100711688
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
0.751
LOC100712228
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
0.751
ENSONIP00000051071
Docosahexaenoic acid omega-hydroxylase CYP4F3-like.
  
0.749
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.