STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pip4k2aPhosphatidylinositol-5-phosphate 4-kinase, type II, alpha a. (426 aa)    
Predicted Functional Partners:
sec61g
SEC61 translocon gamma subunit.
   
 
 0.647
pin1
Peptidyl-prolyl cis-trans isomerase.
    
 0.602
LOC100705399
Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma b.
  
  
 
0.528
Pip4k2c
Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma a.
  
  
 
0.526
LOC100691684
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.505
LOC100707403
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
   
 0.505
Tlnrd1
Talin rod domain containing 1.
    
 0.472
LOC100711808
Talin 1.
    
 0.472
I3J2M2_ORENI
Talin 2a.
    
 0.472
tln2
Talin 2b.
    
 0.472
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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