STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX14Sorting nexin 14. (1022 aa)    
Predicted Functional Partners:
blm
BLM RecQ like helicase.
      
 0.651
sh3rf1
SH3 domain containing ring finger 1.
      
 0.624
synrg
Synergin, gamma.
      
 0.601
LOC100701993
Potassium voltage-gated channel subfamily B member 2; Belongs to the potassium channel family.
      
 0.583
fbxl5
F-box and leucine-rich repeat protein 5.
   
  
 0.581
itfg1
Integrin alpha FG-GAP repeat containing 1.
   
  
 0.509
lrp5
Low density lipoprotein receptor-related protein 5.
     
 0.486
e2f4
E2F transcription factor 4.
      
 0.480
snx13
Sorting nexin 13.
   
 
0.471
phkb
Phosphorylase b kinase regulatory subunit beta isoform X2.
   
  
 0.409
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.