STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
inpp5dInositol polyphosphate-5-phosphatase D. (1133 aa)    
Predicted Functional Partners:
grb2
Growth factor receptor-bound protein 2b.
   
0.882
shc1
SHC (Src homology 2 domain containing) transforming protein 1.
    
 0.782
SHC3
SHC adaptor protein 3.
    
 0.782
SHC4
SHC adaptor protein 4.
    
 0.782
gak
Cyclin G associated kinase.
   
 
 0.683
LOC100707843
Platelet/endothelial cell adhesion molecule 1.
    
 0.681
LOC100710323
Si:dkey-237i9.8.
    
 0.681
LOC100700918
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
 0.670
ptpn11
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
 0.670
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
   
 0.670
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.