STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr81WD repeat domain 81. (2051 aa)    
Predicted Functional Partners:
wdr91
WD repeat domain 91.
   
 
 0.951
becn1
Beclin 1, autophagy related.
    
 
 0.882
vps18
VPS18 core subunit of CORVET and HOPS complexes.
   
  
 0.774
Lg9h3orf58
Divergent protein kinase domain 2Ab.
   
  
 0.716
FIG4
FIG4 phosphoinositide 5-phosphatase.
   
  
 0.716
dlgap5
Discs, large (Drosophila) homolog-associated protein 5.
   
  
 0.703
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
      
 0.702
cog8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
      
 0.701
uvrag
UV radiation resistance associated gene.
      
 0.696
wrap73
WD repeat containing, antisense to TP73.
      
 0.684
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.