STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100706213SH3 domain and tetratricopeptide repeats 2. (1602 aa)    
Predicted Functional Partners:
FIG4
FIG4 phosphoinositide 5-phosphatase.
      
 0.694
ap5s1
Adaptor related protein complex 5 subunit sigma 1.
      
 0.591
SH3TC1
Uncharacterized protein.
      
0.576
gdap1
Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily.
      
 0.574
zbtb3
Zinc finger and BTB domain containing 3.
      
 0.574
sbf2
SET binding factor 2.
      
 0.540
sbf1
SET binding factor 1.
      
 0.540
znf367
Zinc finger protein 367.
      
 0.520
mpz
Myelin protein zero.
      
 0.471
mtmr2
Myotubularin related protein 2.
      
 0.465
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.