STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100700851Guanylate cyclase activator 1d. (188 aa)    
Predicted Functional Partners:
I3K1E4_ORENI
Guanylate cyclase.
    
 0.953
LOC100708779
Guanylate cyclase.
    
 0.913
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.711
LOC100693503
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.711
LOC100694101
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
    
 0.642
guca1a
Guanylate cyclase activator 1A.
  
  
 
0.605
I3JAN1_ORENI
Cyclic nucleotide gated channel beta 3, tandem duplicate 1.
   
 0.592
CNGB1
Cyclic nucleotide gated channel subunit beta 1.
   
 0.592
LOC100709340
Cyclic nucleotide-gated cation channel beta-1 isoform X2.
   
 0.592
wdr90
WD repeat domain 90.
    
 0.515
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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