STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSTM2AV-set and transmembrane domain containing 2A. (245 aa)    
Predicted Functional Partners:
ENSONIP00000035199
Prokineticin.
      
 0.480
LOC100698517
Prodynorphin.
   
  
 0.464
pcsk5
Proprotein convertase subtilisin/kexin type 5b; Belongs to the peptidase S8 family.
      
 0.462
I3JKW5_ORENI
Proprotein convertase subtilisin/kexin type 5a.
      
 0.462
LOC100712567
Relaxin 3a.
      
 0.443
Pdia4
Protein disulfide-isomerase A4; Belongs to the protein disulfide isomerase family.
      
 0.441
sec61g
SEC61 translocon gamma subunit.
      
 0.426
mbtps1
Membrane-bound transcription factor peptidase, site 1.
      
 0.409
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.