STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100696675Paired box 3a. (533 aa)    
Predicted Functional Partners:
TIMM22
Translocase of inner mitochondrial membrane 22.
    
 0.706
timm10
Translocase of inner mitochondrial membrane 10 homolog (yeast).
   
 0.625
cactin
Cactin.
    
 0.608
foxd3
Forkhead box D3.
   
 
 0.565
sox10
SRY-box transcription factor 10.
   
 
 0.531
Zic1
Zic family member 1 (odd-paired homolog, Drosophila).
   
 0.528
ENSONIP00000044364
annotation not available
   
 
 0.513
ENSONIP00000068547
annotation not available
   
 
 0.513
ENSONIP00000072738
Endothelin-3 isoform X1.
      
 0.513
ENSONIP00000043346
Wingless-type MMTV integration site family, member 8.
   
 
 0.508
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.