STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100691229Phosphate cytidylyltransferase 1, choline, alpha a. (371 aa)    
Predicted Functional Partners:
LOC100699097
Choline kinase beta.
     
 0.963
LOC100694841
Choline kinase alpha.
     
 0.963
chpt1
Choline phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.957
cept1
Choline/ethanolamine phosphotransferase 1b; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.957
LOC100710232
Phosphoethanolamine methyltransferase.
  
 
 0.947
LOC100691005
Phosphate cytidylyltransferase 1, choline, beta b.
  
  
 
0.929
pcyt1b
Phosphate cytidylyltransferase 1, choline, beta a.
  
  
 
0.929
LOC100708331
Uncharacterized protein.
     
 0.914
Phospho1
Phosphatase, orphan 1.
     
 0.914
Selenoi
Selenoprotein I; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.643
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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