STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100705600Uncharacterized protein. (2162 aa)    
Predicted Functional Partners:
ENSONIP00000052731
Uncharacterized protein LOC102083309.
  
 
  0.514
LOC100703750
Uncharacterized protein.
  
     0.505
LOC100699573
Uncharacterized protein.
  
   
 0.469
LOC100704633
Uncharacterized protein LOC100704633 isoform X3.
  
     0.462
LOC100706641-2
Uncharacterized protein KIAA0408 isoform X1.
  
     0.429
LOC100691895
Uncharacterized protein LOC100691895 isoform X1.
  
 
  0.422
ENSONIP00000077201
Synaptotagmin-12.
  
 
   0.421
ckap5
Cytoskeleton associated protein 5.
    
 
 0.418
ENSONIP00000069609
annotation not available
  
  
  0.417
plk3
Serine/threonine-protein kinase PLK.
   
 0.404
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.