STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100700503Uncharacterized protein. (1350 aa)    
Predicted Functional Partners:
LOC100703331
Slit homolog 3 (Drosophila).
   
 0.745
I3JR60_ORENI
Slit homolog 2 (Drosophila).
   
 0.745
nyx
Nyctalopin.
   
 0.745
I3KPN0_ORENI
Slit homolog 1a (Drosophila).
   
 0.745
LOC100705354
Slit homolog 1b (Drosophila).
   
 0.745
abl1
Tyrosine-protein kinase.
   
 0.529
abl2
Tyrosine-protein kinase.
   
 0.529
LOC100705111
Immunoglobulin superfamily, DCC subclass, member 4.
    
0.497
neo1
Neogenin 1b.
    
0.497
Dcc
DCC netrin 1 receptor.
    
0.497
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.