STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cep85Centrosomal protein 85. (797 aa)    
Predicted Functional Partners:
I3KA67_ORENI
Rotatin.
      
 0.682
LOC100701740
Macrophage stimulating 1 receptor a.
    
 0.620
mst1r
Macrophage stimulating 1 receptor b.
    
 0.620
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.620
Sox13
SRY-box transcription factor 13.
    
 
 0.597
LOC100691505
Nuclear envelope integral membrane protein 1.
      
 0.589
gstcd
Glutathione S-transferase, C-terminal domain containing.
      
 0.584
ccdc77
Coiled-coil domain containing 77.
      
 0.581
cep192
Centrosomal protein 192.
    
 
 0.577
sox5
SRY-box transcription factor 5.
    
 
 0.532
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.