STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3KZ34_ORENIUncharacterized protein. (1558 aa)    
Predicted Functional Partners:
fancm
Uncharacterized protein.
    
 0.587
pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.562
mus81
MUS81 structure-specific endonuclease subunit.
    
 0.523
Pold1
DNA polymerase.
   
 0.520
snrpd2
Small nuclear ribonucleoprotein Sm D2.
    
 0.496
snrpe
Small nuclear ribonucleoprotein E.
   
 0.478
ddx20
DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.
   
 0.472
LOC100698882
Survival of motor neuron 1, telomeric.
    
 0.455
LOC102080291
Survival motor neuron protein isoform X1.
    
 0.455
Snrpf
Small nuclear ribonucleoprotein F.
    
  0.449
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.