ENSONIP00000041126 protein (Oreochromis niloticus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSONIP00000041126

annotation not available (216 aa)

Predicted Functional Partners:

wdr18

0.640

tex10

0.596

pes1

0.571

I3JEK7_ORENI

0.495

LOC100696264

0.456

ENSONIP00000032100

0.440

ENSONIP00000045107

0.440

ENSONIP00000050053

0.440

calm1

0.440

gnl2

0.422

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSONIP00000032100	ENSONIP00000041126	ENSONIP00000032100	ENSONIP00000041126	Calmodulin 2a (phosphorylase kinase, delta).	annotation not available	0.440
ENSONIP00000032100	I3JEK7_ORENI	ENSONIP00000032100	ENSONIP00000049967	Calmodulin 2a (phosphorylase kinase, delta).	Uncharacterized protein.	0.440
ENSONIP00000041126	ENSONIP00000032100	ENSONIP00000041126	ENSONIP00000032100	annotation not available	Calmodulin 2a (phosphorylase kinase, delta).	0.440
ENSONIP00000041126	ENSONIP00000045107	ENSONIP00000041126	ENSONIP00000045107	annotation not available	annotation not available	0.440
ENSONIP00000041126	ENSONIP00000050053	ENSONIP00000041126	ENSONIP00000050053	annotation not available	annotation not available	0.440
ENSONIP00000041126	I3JEK7_ORENI	ENSONIP00000041126	ENSONIP00000049967	annotation not available	Uncharacterized protein.	0.495
ENSONIP00000041126	LOC100696264	ENSONIP00000041126	ENSONIP00000005314	annotation not available	Myosin, light chain 1, alkali; skeletal, fast.	0.456
ENSONIP00000041126	calm1	ENSONIP00000041126	ENSONIP00000061481	annotation not available	Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.	0.440
ENSONIP00000041126	gnl2	ENSONIP00000041126	ENSONIP00000020509	annotation not available	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	0.422
ENSONIP00000041126	pes1	ENSONIP00000041126	ENSONIP00000050119	annotation not available	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.571
ENSONIP00000041126	tex10	ENSONIP00000041126	ENSONIP00000007612	annotation not available	Testis expressed 10.	0.596
ENSONIP00000041126	wdr18	ENSONIP00000041126	ENSONIP00000005737	annotation not available	WD repeat domain 18.	0.640
ENSONIP00000045107	ENSONIP00000041126	ENSONIP00000045107	ENSONIP00000041126	annotation not available	annotation not available	0.440
ENSONIP00000045107	I3JEK7_ORENI	ENSONIP00000045107	ENSONIP00000049967	annotation not available	Uncharacterized protein.	0.440
ENSONIP00000050053	ENSONIP00000041126	ENSONIP00000050053	ENSONIP00000041126	annotation not available	annotation not available	0.440
ENSONIP00000050053	I3JEK7_ORENI	ENSONIP00000050053	ENSONIP00000049967	annotation not available	Uncharacterized protein.	0.440
I3JEK7_ORENI	ENSONIP00000032100	ENSONIP00000049967	ENSONIP00000032100	Uncharacterized protein.	Calmodulin 2a (phosphorylase kinase, delta).	0.440
I3JEK7_ORENI	ENSONIP00000041126	ENSONIP00000049967	ENSONIP00000041126	Uncharacterized protein.	annotation not available	0.495
I3JEK7_ORENI	ENSONIP00000045107	ENSONIP00000049967	ENSONIP00000045107	Uncharacterized protein.	annotation not available	0.440
I3JEK7_ORENI	ENSONIP00000050053	ENSONIP00000049967	ENSONIP00000050053	Uncharacterized protein.	annotation not available	0.440