STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100692450N-acetyltransferase domain-containing protein. (187 aa)    
Predicted Functional Partners:
srm
Exosome component 10; Belongs to the spermidine/spermine synthase family.
     
 0.923
agmat
Agmatine ureohydrolase (agmatinase); Belongs to the arginase family.
  
 
 0.920
odc1
Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.915
I3JGJ4_ORENI
Orn_Arg_deC_N domain-containing protein.
    
 0.913
I3JGJ5_ORENI
Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.913
LOC100706625
Amine oxidase.
     
 0.905
aoc1
Amine oxidase.
     
 0.902
LOC100690674
Glutamine--fructose-6-phosphate transaminase 1.
  
 0.525
LOC100692652
Glutamine-fructose-6-phosphate transaminase 2.
  
 0.525
pgm2
Phosphoglucomutase 2.
  
 
 0.464
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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