STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3KF91_ORENIIntraflagellar transport 88 homolog. (840 aa)    
Predicted Functional Partners:
ttc26
Tetratricopeptide repeat domain 26.
  
 0.997
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.996
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
   
 0.996
cluap1
Clusterin associated protein 1.
  
 
 0.996
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
  
 
 0.996
ift81
Intraflagellar transport 81 homolog.
   
 0.996
Ift46
Intraflagellar transport 46 homolog (Chlamydomonas).
    
 0.995
I3J9T7_ORENI
TNF receptor-associated factor 3 interacting protein 1.
   
 0.992
ift172
Intraflagellar transport 172.
   
 0.991
ift74
Intraflagellar transport 74.
   
 0.988
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.