STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSONIP00000041686annotation not available (391 aa)    
Predicted Functional Partners:
fancm
Uncharacterized protein.
    
  0.613
ENSONIP00000079848
LOW QUALITY PROTEIN: uncharacterized protein LOC112845972.
 
     0.507
ENSONIP00000048174
annotation not available
 
     0.499
ENSONIP00000057352
annotation not available
 
     0.477
ENSONIP00000059771
annotation not available
 
     0.428
ENSONIP00000051135
annotation not available
 
     0.415
LOC109196341
Uncharacterized protein LOC109196341.
  
     0.411
ENSONIP00000054555
annotation not available
  
     0.410
ENSONIP00000052720
annotation not available
  
     0.409
ENSONIP00000059601
annotation not available
 
     0.403
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.