STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109196341Uncharacterized protein LOC109196341. (631 aa)    
Predicted Functional Partners:
fancm
Uncharacterized protein.
    
  0.613
ENSONIP00000067754
annotation not available
 
     0.589
ENSONIP00000070989
annotation not available
 
     0.560
ENSONIP00000061888
annotation not available
  
     0.502
ENSONIP00000064157
annotation not available
  
     0.468
ENSONIP00000060806
annotation not available
 
     0.467
ENSONIP00000038882
annotation not available
 
     0.441
ENSONIP00000031371
annotation not available
  
     0.438
ENSONIP00000047747
annotation not available
  
     0.434
ENSONIP00000043979
annotation not available
  
     0.430
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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