STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100706641-2Uncharacterized protein KIAA0408 isoform X1. (1197 aa)    
Predicted Functional Partners:
mmachc
Metabolism of cobalamin associated C.
      
 0.582
ccser2
Coiled-coil serine-rich protein 2a.
  
     0.485
lg15h6orf58
Liver-enriched gene 1, tandem duplicate 2.
      
 0.461
RNF146
Ring finger protein 146.
      
 0.457
LOC100712401
Zgc:101765.
      
 0.445
lcorl
Ligand-dependent nuclear receptor corepressor-like protein isoform X1.
  
     0.443
LOC100705600
Uncharacterized protein.
  
     0.429
LOC100703750
Uncharacterized protein.
  
     0.426
scara5
Scavenger receptor class A member 5; Ferritin receptor that mediates non-transferrin-dependent delivery of iron. Mediates cellular uptake of ferritin-bound iron by stimulating ferritin endocytosis from the cell surface with consequent iron delivery within the cell. Delivery of iron to cells by ferritin is required for the development of specific cell types, suggesting the existence of cell type-specific mechanisms of iron traffic in organogenesis, which alternatively utilize transferrin or non- transferrin iron delivery pathways.
      
 0.426
tcf20
Transcription factor 20 isoform X1.
  
     0.425
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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