STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSONIP00000043516Ferritin, middle subunit-like. (239 aa)    
Predicted Functional Partners:
Ncoa4
Nuclear receptor coactivator 4.
     
 0.906
gak
Cyclin G associated kinase.
     
 0.620
gclm
Glutamate-cysteine ligase, modifier subunit.
      
 0.538
LOC100700939
Cytoglobin 1; Belongs to the globin family.
     
 0.511
mvd
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
      
 0.494
LOC100709606
Peroxiredoxin 4.
  
  
 0.482
Sh3d19
SH3 domain containing 19.
   
 
 0.447
Eef1g
Eukaryotic translation elongation factor 1 gamma.
      
 0.434
dennd10
DENN domain containing 10.
  
  
 0.428
prdx3
Peroxiredoxin 3.
  
  
 0.428
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.