STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atp23Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family. (239 aa)    
Predicted Functional Partners:
phb
Prohibitin.
    
 
 0.740
Oma1
OMA1 zinc metallopeptidase.
    
 
 0.706
ATP6
ATP synthase subunit a.
    
 
 0.703
mipep
Mitochondrial intermediate peptidase.
      
 0.694
dpp3
Dipeptidyl peptidase 3; Belongs to the peptidase M49 family.
      
 0.694
chchd4
Mitochondrial intermembrane space import and assembly protein 40.
    
 
 0.669
LOC100696963
Coiled-coil-helix-coiled-coil-helix domain containing 4b.
    
 
 0.662
Xpnpep3
X-prolyl aminopeptidase 3, mitochondrial.
      
 0.659
LOC100690566
Prohibitin.
    
 
 0.629
PHB2
Prohibitin.
    
 
 0.629
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.