STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
edrf1Erythroid differentiation regulatory factor 1. (1251 aa)    
Predicted Functional Partners:
hikeshi
Heat shock protein nuclear import factor hikeshi.
      
 0.586
kcnk5
Potassium channel, subfamily K, member 5a; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.463
LOC100691950
G protein-coupled receptor 182; Belongs to the G-protein coupled receptor 1 family.
      
 0.456
pacc1
Proton activated chloride channel 1.
      
 0.450
pik3cd
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.
      
 0.447
LOC100693507
Immunoglobulin superfamily member 5 isoform X1.
      
 0.420
LOC100712476
Immunoglobulin superfamily member 5.
      
 0.420
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.