STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100706924DnaJ (Hsp40) homolog, subfamily C, member 18. (785 aa)    
Predicted Functional Partners:
NFATC1
Nuclear factor of activated T cells 1.
    
 0.970
LOC100711301
Nuclear factor of activated T cells 1.
    
 0.970
calm1
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.965
nfatc2
Nuclear factor of activated T cells 2a.
    
 0.958
nfatc3
Nuclear factor of activated T cells 3a.
    
 0.953
LOC100696566
RHD domain-containing protein.
    
 0.942
calml4
Calmodulin-like 4a.
    
 0.940
LOC100701793
Calmodulin-like 4b.
    
 0.940
I3IY44_ORENI
WD repeat domain 92.
   
 0.912
Plcg2
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades.
   
 0.903
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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