STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3KB63_ORENILink domain-containing protein. (344 aa)    
Predicted Functional Partners:
mmp9
Matrix metallopeptidase 9.
   
 0.879
tnfaip6
Tumor necrosis factor, alpha-induced protein 6.
     
0.762
LOC100691361
Heparin-binding EGF-like growth factor a.
    
 
 0.723
LOC100710883
Moesin a.
   
 
 0.711
LOC100709183
Uncharacterized protein.
      
 0.694
ENSONIP00000067297
annotation not available
      
 0.693
LOC100702318
Galectin.
   
 
 0.674
nf2
Neurofibromin 2a (merlin).
   
 
 0.670
LOC100697642
Neurofibromin 2b (merlin).
   
 
 0.670
LOC102077463
Hematopoietic progenitor cell antigen CD34.
      
 0.664
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.