STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Grik5Glutamate receptor, ionotropic, kainate 5. (1027 aa)    
Predicted Functional Partners:
GRIK3
Glutamate ionotropic receptor kainate type subunit 3.
  
 
0.669
LOC100699029
Glutamate receptor, ionotropic, kainate 1a.
  
 
0.668
LOC100705871
Glutamate receptor, ionotropic, kainate 1b.
  
 
0.667
GRIK2
Glutamate receptor ionotropic, kainate 2 isoform X1.
  
 
0.667
LOC100702227
Glutamate ionotropic receptor kainate type subunit 2.
  
 
0.666
LOC100706095
Glutamate receptor, metabotropic 3.
   
  
 0.532
TUBA4A
Tubulin, alpha 8 like 2; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
      
 0.461
CKB
Creatine kinase B; Belongs to the ATP:guanido phosphotransferase family.
      
 0.459
suds3
SDS3 homolog, SIN3A corepressor complex component.
      
 0.435
eef1e1
Eukaryotic translation elongation factor 1 epsilon 1.
      
 0.424
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.