STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSONIP00000050809annotation not available (75 aa)    
Predicted Functional Partners:
NUP54
Nucleoporin 54.
   
 0.901
nup155
Nucleoporin 155.
   
 0.898
nup153
Nucleoporin 153.
   
 0.872
NUP214
Nucleoporin 214.
   
 0.871
nup85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.870
nup88
Nucleoporin 88.
    
 0.864
nup133
Nucleoporin 133.
   
 0.864
nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.860
seh1l
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
   
 0.852
nup205
Nucleoporin 205.
   
 0.846
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.