STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100711807Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (281 aa)    
Predicted Functional Partners:
LOC100708633
Carboxypeptidase A1 (pancreatic).
   
 
 0.684
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
   
  
 0.596
I3KRC2_ORENI
Uncharacterized protein.
      
 0.588
RRM2
Ribonucleotide reductase regulatory subunit M2.
      
 0.588
lasp1
LIM and SH3 protein 1.
      
 0.586
LOC100710041
Ribonucleotide reductase M2 b.
      
 0.582
LOC100701740
Macrophage stimulating 1 receptor a.
    
 0.571
mst1r
Macrophage stimulating 1 receptor b.
    
 0.571
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.571
ENSONIP00000045181
annotation not available
  
     0.523
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.