STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sfmbt2Scm like with four mbt domains 2. (984 aa)    
Predicted Functional Partners:
RING1
RING-type domain-containing protein.
    
 0.600
rnf2
Ring finger protein 2.
    
 0.600
I3JQ01_ORENI
YY1 associated factor 2.
    
 0.570
LOC100701658
YY1 associated factor 2.
    
 0.570
rybp
RING1 and YY1 binding protein b.
    
 0.570
eed
Embryonic ectoderm development.
   
 0.530
Pcgf5
Polycomb group ring finger 5a.
   
 0.528
PCGF3
Polycomb group ring finger 3.
   
 0.524
tfdp1
Transcription factor.
   
 0.514
mphosph8
M-phase phosphoprotein 8.
    
 0.496
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.