STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100534467Homeobox domain-containing protein. (248 aa)    
Predicted Functional Partners:
LOC100534464
Homeobox C5a.
   
 
0.793
hoxc6
Homeobox C6a.
   
 
0.766
LOC100702637
Homeobox B6b.
   
 
0.700
LOC100697602
Homeobox domain-containing protein.
   
 
0.700
Hoxd4
Homeobox D4a.
   
 
0.656
HOXA7
Homeobox A7.
   
 
0.576
I3JG03_ORENI
Homeobox domain-containing protein.
   
 
0.572
Hoxb5
Homeobox B5b.
   
 
0.572
hoxc9
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
   
 
0.564
LOC100698401
Homeobox B4a.
  
  
0.554
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.