STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100709487Spermatogenesis-associated protein 6. (308 aa)    
Predicted Functional Partners:
spata20
Spermatogenesis associated 20.
      
 0.750
suox
Sulfite oxidase.
      
 0.702
Spata17
Uncharacterized protein.
      
 0.652
ENSONIP00000076950
Spermatogenesis associated 7.
      
 0.628
ENSONIP00000031415
Speriolin-like protein isoform X2.
      
 0.570
LOC100704412
Fas apoptotic inhibitory molecule a.
      
 0.567
LOC100691039
Testis expressed 2.
      
 0.542
spata22
Uncharacterized protein.
      
 0.519
smox
Spermine oxidase.
      
 0.512
SPATA5
Spermatogenesis associated 5.
      
 0.510
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.