STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttc14Tetratricopeptide repeat domain 14. (786 aa)    
Predicted Functional Partners:
CLDN18
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.773
pnisr
PNN-interacting serine/arginine-rich protein.
   
   0.773
mccc1
Methylcrotonoyl-CoA carboxylase 1 (alpha).
      
 0.733
dnajc19
DnaJ (Hsp40) homolog, subfamily C, member 19.
      
 0.702
fxr1
Fragile X mental retardation, autosomal homolog 1.
 
 
 
 0.684
LOC100700059
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
      
 0.656
ZFC3H1
Zinc finger C3H1-type containing.
   
   0.639
rnpc3
RNA-binding region (RNP1, RRM) containing 3.
   
   0.592
mbtps2
Membrane-bound transcription factor peptidase, site 2.
      
 0.590
ess2
Ess-2 splicing factor homolog.
   
 
 0.529
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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