STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100702087G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (354 aa)    
Predicted Functional Partners:
ENSONIP00000058069
C-C motif chemokine 3.
   
 0.825
LOC109202766
Monocyte chemotactic protein 1B.
   
 0.714
LOC109202764
SCY domain-containing protein.
    
 0.710
LOC100705119
Arrestin, beta 1.
    
 0.710
ENSONIP00000049557
C-C motif chemokine 4-like.
    
 0.710
LOC100697215
Arrestin, beta 2a.
    
 0.710
ENSONIP00000073123
C-C motif chemokine 4.
    
 0.710
ENSONIP00000078528
C-C motif chemokine 17.
    
 0.710
LOC100710115
SCY domain-containing protein.
   
 0.702
grk1
G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily.
    
  0.694
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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