STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109196111Poliovirus receptor-related protein 1. (417 aa)    
Predicted Functional Partners:
LOC100707658
PVR cell adhesion molecule related 2 like.
    
 
0.715
LOC100711853
Si:ch73-22o12.1.
    
 
0.715
ENSONIP00000047784
Poliovirus receptor-related protein 1.
    
  0.715
LOC102081907
Uncharacterized protein.
    
 
0.692
PARD3
Par-3 family cell polarity regulator.
    
  0.670
LOC100698856
Par-3 family cell polarity regulator alpha, b.
    
  0.670
LOC102079182
Uncharacterized protein.
  
  
 
0.657
I3KG67_ORENI
Uncharacterized protein.
  
  
 
0.656
LOC102080174
Poliovirus receptor-related protein 3.
  
  
 
0.655
LOC109194266
Uncharacterized protein.
  
  
 
0.655
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.