STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100700077Fatty acid desaturase 2. (452 aa)    
Predicted Functional Partners:
FDX1
Ferredoxin 1.
  
 
 0.899
fdx2
Ferredoxin 2.
  
 
 0.899
SCD
Stearoyl-CoA desaturase; Belongs to the fatty acid desaturase type 1 family.
  
 
 0.776
sc5d
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
  
 
 0.764
LOC100696185
Delta7-sterol 5-desaturase.
  
 
 0.764
elovl5
Elongation of very long chain fatty acids protein 5; Catalyzes the first and rate-limiting reaction of the four reactions that constitute the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process allows the addition of 2 carbons to the chain of long- and very long-chain fatty acids (VLCFAs) per cycle. Condensing enzyme that acts specifically toward polyunsaturated acyl-CoA with the higher activity toward C18:3(n-6) acyl-CoA. May participate to the production of monounsaturated and of polyunsaturated VLCFAs of different chain lengths that are involv [...]
   
 
 0.752
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
  
 0.714
msmo1
Methylsterol monooxygenase 1; Belongs to the sterol desaturase family.
  
 
 0.706
LOC100696013
Cholesterol 25-hydroxylase like 3; Belongs to the sterol desaturase family.
  
 
 0.706
ch25h
Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family.
  
 
 0.706
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.