STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asb6Ankyrin repeat and SOCS box containing 6. (436 aa)    
Predicted Functional Partners:
rnf41
Ring finger protein 41.
   
 0.821
LOC100703753
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.810
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.810
rnf7
Ring finger protein 7.
    
 0.775
asb1
Ankyrin repeat and SOCS box containing 1.
  
 
 0.765
asb7
Ankyrin repeat and SOCS box containing 7.
    
 0.721
asb12
Ankyrin repeat and SOCS box-containing 12b.
  
  
 0.646
commd8
COMM domain containing 8.
   
  0.644
I3KA21_ORENI
Ankyrin repeat and SOCS box containing 11.
  
 
 0.640
commd1
Copper metabolism (Murr1) domain containing 1.
    
  0.634
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.