STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100711910Zgc:91968. (241 aa)    
Predicted Functional Partners:
LOC100711455
Premelanosome protein a.
      
 0.580
ENSONIP00000073014
Solute carrier family 24 member 5.
      
 0.533
tyrp1
Tyrosinase related protein 1.
   
  
 0.521
dcaf17
Ddb1 and cul4 associated factor 17.
      
 0.497
Ier2
Immediate early response 2b.
      
 0.481
Rpl37a
Large subunit ribosomal protein L37Ae.
      
 0.480
AREL1
Apoptosis resistant E3 ubiquitin protein ligase 1.
  
     0.456
mfsd12
Major facilitator superfamily domain containing 12a.
      
 0.454
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.