STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100706635Carboxypeptidase; Belongs to the peptidase S10 family. (468 aa)    
Predicted Functional Partners:
LOC100708354
Galactosidase, beta 1-like; Belongs to the glycosyl hydrolase 35 family.
   
 0.807
glb1
Beta-galactosidase.
   
 0.807
neu1
Neuraminidase 1.
   
 0.774
pebp1
Phosphatidylethanolamine binding protein 1.
   
 
 0.630
PEBP4
Phosphatidylethanolamine-binding protein 4 isoform X1.
   
 
 0.630
neu4
Sialidase 4.
    
 0.624
os9
OS9 endoplasmic reticulum lectin.
   
 
 0.583
erlec1
Endoplasmic reticulum lectin 1.
   
 
 0.583
LOC100709410
Beta-galactosidase.
   
 0.550
LOC100709681
Beta-galactosidase.
   
 0.550
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.