STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
morn5MORN repeat containing 5. (234 aa)    
Predicted Functional Partners:
morn3
MORN repeat containing 3.
  
  
 0.783
I3J1N4_ORENI
EF-hand calcium binding domain 1.
   
   0.682
PEBP4
Phosphatidylethanolamine-binding protein 4 isoform X1.
      
 0.579
LOC100695509
RAB guanine nucleotide exchange factor (GEF) 1, like.
    
 0.563
LOC100697359
Uncharacterized protein.
    
 0.563
Rabgef1
RAB guanine nucleotide exchange factor (GEF) 1.
    
 0.563
Mns1
Meiosis-specific nuclear structural 1.
    
 
 0.538
LOC100690678
Uncharacterized protein.
  
   
0.517
LOC100690317
MORN repeat containing 4.
      
0.491
dnali1
Dynein, axonemal, light intermediate chain 1.
   
 
 0.471
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.