STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3KCW3_ORENIWAS protein family homolog 1. (474 aa)    
Predicted Functional Partners:
washc3
WASH complex subunit 3.
    
 0.963
washc5
WASH complex subunit 5.
   
 0.949
LOC100707740
CAP-ZIP_m domain-containing protein.
    
 
 0.905
washc4
WASH complex subunit 4.
    
 0.900
LOC100697803
Zgc:153184.
    
 
 0.796
vps35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.626
ENSONIP00000075873
Heat shock factor binding protein 1a.
      
 0.587
Api5
Apoptosis inhibitor 5.
      
 0.549
nckipsd
NCK interacting protein with SH3 domain.
     
 0.524
ccdc93
Coiled-coil domain containing 93.
    
 
 0.522
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.