STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCOCShort coiled-coil protein a. (80 aa)    
Predicted Functional Partners:
arl1
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.706
LOC100698078
Si:dkey-288i20.2.
   
 
 0.688
fez2
Si:ch211-57i17.1.
   
 
 0.688
Fez1
Fasciculation and elongation protein zeta 1 (zygin I).
   
 
 0.687
I3KP93_ORENI
Zgc:171459.
   
 
 0.680
LOC102075886
Uncharacterized LOC102075886.
   
 
 0.587
ENSONIP00000076370
annotation not available
   
 
 0.587
prpf38b
Uncharacterized protein.
      
 0.556
dlgap3
Discs, large (Drosophila) homolog-associated protein 3.
      
 0.549
arfrp1
ADP-ribosylation factor related protein 1.
      
 0.481
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.