STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100707347Stathmin; Belongs to the stathmin family. (208 aa)    
Predicted Functional Partners:
LOC100693191
Solute carrier family 32 member 1.
   
  
 0.627
gng3
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
  
 0.597
LOC100692028
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
     
 0.594
phb
Prohibitin.
     
 0.495
LOC100696606
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
   
 0.495
adra1b
Adrenoceptor alpha 1Bb.
     
 0.489
SNTA1
Syntrophin alpha 1.
    
 
 0.489
LOC100697103
Neuroligin 3b.
    
 0.487
dhfr
Dihydrofolate reductase.
      
 0.482
COX5B
Uncharacterized protein.
      
 0.480
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.