STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100705031Myosin heavy chain, fast skeletal muscle. (1935 aa)    
Predicted Functional Partners:
LOC100696264
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.811
LOC100708807
Myosin, light chain 6, alkali, smooth muscle and non-muscle.
   
 0.630
ENSONIP00000036654
annotation not available
   
 0.630
LOC100710463
Uncharacterized protein.
   
 0.579
LOC100708845
Uncharacterized protein.
   
 0.579
LOC100697131
Myosin, light chain 9a, regulatory.
   
 0.579
LOC100693213
Myosin, light chain 13.
   
 0.568
LOC100694366
Uncharacterized protein.
   
 0.568
LOC100709026
Myosin light chain, phosphorylatable, fast skeletal muscle b.
   
 0.534
LOC100690118
Myosin, light chain 2b, regulatory, cardiac, slow.
   
 0.534
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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