STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
utp23UTP23 small subunit processome component. (270 aa)    
Predicted Functional Partners:
wdr43
WD repeat domain 43.
   
 
 0.984
I3JVK2_ORENI
Zona pellucida glycoprotein d.
   
 0.979
krr1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.979
LOC102080373
Uncharacterized protein LOC102080373 isoform X1.
   
 0.979
LOC100701316
UTP14C small subunit processome component.
   
 
 0.965
ddx52
DEAD (Asp-Glu-Ala-Asp) box polypeptide 52.
   
 0.950
utp11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 
 0.942
utp3
UTP3 small subunit processome component.
   
 
 0.923
wdr46
WD repeat domain 46.
   
 
 0.913
kri1
KRI1 homolog.
   
 
 0.909
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.