scin protein (Oreochromis niloticus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

scin

Scinderin. (789 aa)

Predicted Functional Partners:

gsn

0.903

LOC100699882

0.902

cog8

0.653

pikfyve

0.650

LOC100707864

0.650

PIP5K1A

0.650

LOC100701476

0.650

Pip5k1c

0.650

Pip4k2c

0.650

LOC100698290

0.650

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC100698290	LOC100699882	ENSONIP00000076337	ENSONIP00000063416	Phosphatidylinositol-4-phosphate 5-kinase, type I, beta a.	Scinderin like b.	0.650
LOC100698290	LOC100701476	ENSONIP00000076337	ENSONIP00000058661	Phosphatidylinositol-4-phosphate 5-kinase, type I, beta a.	Phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b.	0.902
LOC100698290	LOC100707864	ENSONIP00000076337	ENSONIP00000020329	Phosphatidylinositol-4-phosphate 5-kinase, type I, beta a.	Phosphatidylinositol-4-phosphate 5-kinase, type I, beta b.	0.901
LOC100698290	PIP5K1A	ENSONIP00000076337	ENSONIP00000024865	Phosphatidylinositol-4-phosphate 5-kinase, type I, beta a.	Phosphatidylinositol-4-phosphate 5-kinase type 1 alpha.	0.902
LOC100698290	Pip4k2c	ENSONIP00000076337	ENSONIP00000065579	Phosphatidylinositol-4-phosphate 5-kinase, type I, beta a.	Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma a.	0.937
LOC100698290	Pip5k1c	ENSONIP00000076337	ENSONIP00000059343	Phosphatidylinositol-4-phosphate 5-kinase, type I, beta a.	Phosphatidylinositol-4-phosphate 5-kinase, type I, gamma a.	0.902
LOC100698290	gsn	ENSONIP00000076337	ENSONIP00000028796	Phosphatidylinositol-4-phosphate 5-kinase, type I, beta a.	Gelsolin a.	0.650
LOC100698290	scin	ENSONIP00000076337	ENSONIP00000059885	Phosphatidylinositol-4-phosphate 5-kinase, type I, beta a.	Scinderin.	0.650
LOC100699882	LOC100698290	ENSONIP00000063416	ENSONIP00000076337	Scinderin like b.	Phosphatidylinositol-4-phosphate 5-kinase, type I, beta a.	0.650
LOC100699882	LOC100701476	ENSONIP00000063416	ENSONIP00000058661	Scinderin like b.	Phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b.	0.650
LOC100699882	LOC100707864	ENSONIP00000063416	ENSONIP00000020329	Scinderin like b.	Phosphatidylinositol-4-phosphate 5-kinase, type I, beta b.	0.650
LOC100699882	PIP5K1A	ENSONIP00000063416	ENSONIP00000024865	Scinderin like b.	Phosphatidylinositol-4-phosphate 5-kinase type 1 alpha.	0.650
LOC100699882	Pip4k2c	ENSONIP00000063416	ENSONIP00000065579	Scinderin like b.	Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma a.	0.650
LOC100699882	Pip5k1c	ENSONIP00000063416	ENSONIP00000059343	Scinderin like b.	Phosphatidylinositol-4-phosphate 5-kinase, type I, gamma a.	0.650
LOC100699882	cog8	ENSONIP00000063416	ENSONIP00000004178	Scinderin like b.	Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.	0.653
LOC100699882	gsn	ENSONIP00000063416	ENSONIP00000028796	Scinderin like b.	Gelsolin a.	0.902
LOC100699882	pikfyve	ENSONIP00000063416	ENSONIP00000017290	Scinderin like b.	Phosphoinositide kinase, FYVE finger containing.	0.650
LOC100699882	scin	ENSONIP00000063416	ENSONIP00000059885	Scinderin like b.	Scinderin.	0.902
LOC100701476	LOC100698290	ENSONIP00000058661	ENSONIP00000076337	Phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b.	Phosphatidylinositol-4-phosphate 5-kinase, type I, beta a.	0.902
LOC100701476	LOC100699882	ENSONIP00000058661	ENSONIP00000063416	Phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b.	Scinderin like b.	0.650