STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ikbkgInhibitor of nuclear factor kappa B kinase regulatory subunit gamma. (621 aa)    
Predicted Functional Partners:
LOC100698148
Protein kinase domain-containing protein.
   
 0.987
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.981
LOC100692869
Component of inhibitor of nuclear factor kappa B kinase complex.
   
 0.978
tab3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.977
tab2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.977
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.961
LOC100704346
TRAF family member-associated NF-kappa-B activator isoform X2.
   
 0.954
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.950
tbk1
TANK-binding kinase 1.
   
 0.950
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
    
 0.946
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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