STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSONIP00000061056Poly [ADP-ribose] polymerase 10/14/15. (1031 aa)    
Predicted Functional Partners:
fdps
RUN and SH3 domain containing 1; Belongs to the FPP/GGPP synthase family.
      
 0.653
trpt1
tRNA phosphotransferase 1.
     
 0.640
Parp2
Poly [ADP-ribose] polymerase.
    
 
 0.612
LRPPRC
Leucine-rich pentatricopeptide repeat containing.
      
 0.581
parp3
Poly [ADP-ribose] polymerase.
    
 
 0.578
RNF146
Ring finger protein 146.
      
 0.567
parp16
Poly [ADP-ribose] polymerase.
      
 0.493
pycr3
Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.
      
 0.485
parp4
Poly [ADP-ribose] polymerase.
    
 
 0.474
parp1
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
    
 
 0.466
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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